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  5. EDJ91446

EDJ91446 (rpsR, CGSHi22421_06742)


Aliases : rpsR, CGSHi22421_06742

Description : 30S ribosomal protein S18 [Ensembl]. Ribosomal protein S18 [Interproscan].


Gene families : OG_02_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91446
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC77159 rpsR, b4202 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.3 OrthoFinder
AAL00198 spr1394, rpsR 30S Ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AAL23213 STM4393, rpsR 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.31 OrthoFinder
ADK87142 rpsR, MPNE_0262 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.14 OrthoFinder
AEA92696 rpsR, OG1RF_10009 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
AGT26291 N559_4699 30S ribosomal protein S18 [Ensembl]. 0.11 OrthoFinder
AHY40278 rpsR, CJ8421_05330 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
AKI48022 rpsR, L2625_00047 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.18 OrthoFinder
AKP14205 rpsR, WX61_00116 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CCG26822 No alias SSU ribosomal protein S18p @ SSU ribosomal protein S18p,... 0.08 OrthoFinder
CPC89687 rpsR, ERS093114_01560 30S ribosomalprotein S18p [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
CRO53994 rpsR 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder
KNA49061 VCV51_033836 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 19 68
No external refs found!