EDJ91463 (CGSHi22421_06827)

Aliases : CGSHi22421_06827

Description : DNA primase [Ensembl]. Ribosomal protein S21 [Interproscan].

Gene families : OG_02_0000673 (OrthoFinder) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ91463
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AAC76101	rpsU, b3065	30S ribosomal subunit protein S21 [Ensembl]. Ribosomal...	0.09	OrthoFinder
AAL22083	STM3209, rpsU	30S ribosomal subunit protein S21 [Ensembl]. Ribosomal...	0.08	OrthoFinder
CRO83709	rpsU	30S ribosomal protein S21 [Ensembl]. Ribosomal protein...	0.06	OrthoFinder
KNA49206	VCV51_033802	ribosomal protein S21 [Ensembl]. Ribosomal protein S21...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Enrichment
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0009254	peptidoglycan turnover	IEP	Enrichment
MF	GO:0016597	amino acid binding	IEP	Enrichment
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	Enrichment
MF	GO:0016763	pentosyltransferase activity	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001911	Ribosomal_S21	4	56

External Links

No external refs found!

EDJ91463 (CGSHi22421_06827)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation