Coexpression cluster: Cluster_3 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006547 histidine metabolic process 2.59% (5/193) 3.18 3.5e-05 0.007795
GO:0000105 histidine biosynthetic process 2.59% (5/193) 3.18 3.5e-05 0.007795
GO:0008152 metabolic process 31.09% (60/193) 0.64 7.8e-05 0.011628
GO:0044237 cellular metabolic process 24.87% (48/193) 0.67 0.000313 0.017489
GO:0055114 obsolete oxidation-reduction process 8.29% (16/193) 1.35 0.00028 0.017862
GO:0046872 metal ion binding 6.22% (12/193) 1.57 0.000392 0.019493
GO:0044281 small molecule metabolic process 12.44% (24/193) 1.06 0.000263 0.019623
GO:0006520 cellular amino acid metabolic process 7.25% (14/193) 1.52 0.000185 0.020683
GO:0043169 cation binding 6.74% (13/193) 1.56 0.000241 0.021559
GO:0016491 oxidoreductase activity 8.81% (17/193) 1.23 0.000562 0.025099
GO:0016151 nickel cation binding 1.55% (3/193) 3.44 0.000768 0.03119
GO:0005488 binding 28.5% (55/193) 0.54 0.001179 0.043911
GO:0003824 catalytic activity 32.64% (63/193) 0.46 0.002095 0.046815
GO:0019752 carboxylic acid metabolic process 7.25% (14/193) 1.25 0.001473 0.047036
GO:0043436 oxoacid metabolic process 7.25% (14/193) 1.25 0.001473 0.047036
GO:0006807 nitrogen compound metabolic process 21.76% (42/193) 0.61 0.002089 0.049142
GO:0006082 organic acid metabolic process 7.25% (14/193) 1.18 0.002347 0.04996
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_3 0.028 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.051 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_11 0.032 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_12 0.031 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.029 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_3 0.027 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_12 0.037 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.032 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.028 OrthoFinder Compare
Escherichia coli HCCA Cluster_2 0.042 OrthoFinder Compare
Escherichia coli HCCA Cluster_14 0.028 OrthoFinder Compare
Escherichia coli HCCA Cluster_18 0.032 OrthoFinder Compare
Escherichia coli HCCA Cluster_31 0.029 OrthoFinder Compare
Escherichia coli HCCA Cluster_32 0.042 OrthoFinder Compare
Escherichia coli HCCA Cluster_37 0.069 OrthoFinder Compare
Escherichia coli HCCA Cluster_40 0.03 OrthoFinder Compare
Escherichia coli HCCA Cluster_41 0.031 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_2 0.033 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_5 0.033 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_7 0.04 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_10 0.036 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_2 0.029 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_11 0.063 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_29 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_37 0.037 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_40 0.037 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_42 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_44 0.054 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_7 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_10 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_15 0.041 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_24 0.031 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_35 0.037 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_4 0.028 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_7 0.044 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.044 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_17 0.042 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.057 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_26 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_35 0.039 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_47 0.046 OrthoFinder Compare
Salmonella enterica HCCA Cluster_6 0.047 OrthoFinder Compare
Salmonella enterica HCCA Cluster_10 0.054 OrthoFinder Compare
Salmonella enterica HCCA Cluster_15 0.036 OrthoFinder Compare
Salmonella enterica HCCA Cluster_30 0.037 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.047 OrthoFinder Compare
Salmonella enterica HCCA Cluster_32 0.038 OrthoFinder Compare
Salmonella enterica HCCA Cluster_35 0.036 OrthoFinder Compare
Salmonella enterica HCCA Cluster_39 0.047 OrthoFinder Compare
Salmonella enterica HCCA Cluster_44 0.031 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_1 0.061 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_5 0.04 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_12 0.034 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_22 0.043 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_25 0.03 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_3 0.056 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_14 0.033 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_18 0.03 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_21 0.031 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.029 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.031 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_12 0.041 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_17 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_1 0.051 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_5 0.042 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_17 0.041 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_21 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_22 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_25 0.048 OrthoFinder Compare
Sequences (193) (download table)

InterPro Domains

GO Terms

Family Terms