EDJ91477 (CGSHi22421_06897)

Aliases : CGSHi22421_06897

Description : 50S ribosomal protein L11 [Ensembl]. Ribosomal protein L11 [Interproscan].

Gene families : OG_02_0000363 (OrthoFinder) Phylogenetic Tree(s): OG0000363_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ91477
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AAC76957	rplK, b3983	50S ribosomal subunit protein L11 [Ensembl]. Ribosomal...	0.14	OrthoFinder
AAK99359	spr0555, rplK	50S Ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.03	OrthoFinder
AAL22977	STM4149, rplK	50 S ribosomal subunit protein L11 [Ensembl]. Ribosomal...	0.17	OrthoFinder
ADK86752	rplK, MPNE_0251	ribosomal protein L11 [Ensembl]. Ribosomal protein L11...	0.07	OrthoFinder
AGT26521	N559_4937	50S ribosomal protein L11 [Ensembl]. RNA binding domain,...	0.11	OrthoFinder
AHY39727	rplK, CJ8421_02370	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.1	OrthoFinder
AKI48215	rplK, L2625_00265	ribosomal protein L11 [Ensembl]. Ribosomal protein L11...	0.04	OrthoFinder
AKP15107	rplK, WX61_01053	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.04	OrthoFinder
CCG26741	No alias	LSU ribosomal protein L11p (L12e) [Ensembl]. Ribosomal...	0.05	OrthoFinder
CCL20639	rplK, BN171_80004	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.04	OrthoFinder
CCP43383	rplK, Rv0640	50S ribosomal protein L11 RplK [Ensembl]. Ribosomal...	0.09	OrthoFinder
CPC57428	rplK, ERS093114_00842	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.09	OrthoFinder
CRO73449	rplK	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.08	OrthoFinder
KNA49132	VCV51_033812	ribosomal protein L11 [Ensembl]. Ribosomal protein L11...	0.11	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Enrichment
BP	GO:0001510	RNA methylation	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003848	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity	IEP	Enrichment
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Enrichment
MF	GO:0004417	hydroxyethylthiazole kinase activity	IEP	Enrichment
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Enrichment
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006772	thiamine metabolic process	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Enrichment
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Enrichment
BP	GO:0009228	thiamine biosynthetic process	IEP	Enrichment
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
MF	GO:0016763	pentosyltransferase activity	IEP	Enrichment
MF	GO:0016778	diphosphotransferase activity	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0031167	rRNA methylation	IEP	Enrichment
BP	GO:0034470	ncRNA processing	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Enrichment
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
BP	GO:0070475	rRNA base methylation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR020784	Ribosomal_L11_N	2	67
IPR020783	Ribosomal_L11_C	72	140

External Links

No external refs found!

EDJ91477 (CGSHi22421_06897)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation