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  5. EDJ91659

EDJ91659 (rpmA, CGSHi22421_07888)


Aliases : rpmA, CGSHi22421_07888

Description : 50S ribosomal protein L27 [Ensembl]. Ribosomal L27 protein [Interproscan].


Gene families : OG_02_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91659
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76217 rpmA, b3185 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal... 0.05 OrthoFinder
AAL22172 STM3303, rpmA 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal... 0.06 OrthoFinder
ADK87189 rpmA, MPNE_0380 ribosomal protein L27 [Ensembl]. Ribosomal L27 protein... 0.03 OrthoFinder
AEA93392 rpmA, OG1RF_10705 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.05 OrthoFinder
AGT22370 N559_0572 50S ribosomal protein L27 [Ensembl]. 0.04 OrthoFinder
AHY39368 rpmA, CJ8421_00485 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.03 OrthoFinder
AKI49537 rpmA, L2625_01642 ribosomal protein L27 [Ensembl]. Ribosomal protein L27... 0.04 OrthoFinder
CBI66822 rpmA, HPB8_1265 large subunit ribosomal protein L27 [Ensembl]. Ribosomal... 0.03 OrthoFinder
CCG26585 No alias LSU ribosomal protein L27p [Ensembl]. Ribosomal L27... 0.03 OrthoFinder
CCP45234 rpmA, Rv2441c 50S ribosomal protein L27 RpmA [Ensembl]. Ribosomal L27... 0.03 OrthoFinder
CPC84847 rpmA, ERS093114_01475 50S ribosomal protein L25 [Ensembl]. Ribosomal L27... 0.06 OrthoFinder
CRN65841 rpmA 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.07 OrthoFinder
KNA50265 VCV51_033696 ribosomal L27 protein [Ensembl]. Ribosomal L27 protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0008962 phosphatidylglycerophosphatase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016989 sigma factor antagonist activity IEP Enrichment
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 2 82
No external refs found!