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  5. EDJ91699

EDJ91699 (rpsB, CGSHi22421_08088)


Aliases : rpsB, CGSHi22421_08088

Description : 30S ribosomal protein S2 [Ensembl]. Elongation factor TS [Interproscan].


Gene families : OG_02_0000385 (OrthoFinder) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91699
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC73281 tsf, b0170 translation elongation factor EF-Ts [Ensembl].... 0.07 OrthoFinder
AAL00821 spr2019, tsf Elongation factor TS [Ensembl]. Elongation factor TS... 0.05 OrthoFinder
AAL19181 STM0217, tsf protein chain elongation factor EF-Ts [Ensembl].... 0.06 OrthoFinder
ADK86760 tsf, MPNE_0736 translation elongation factor Ts [Ensembl]. 0.05 OrthoFinder
AEA94519 tsf, OG1RF_11832 elongation factor EF1B [Ensembl]. Elongation factor TS... 0.04 OrthoFinder
AGT25853 N559_4231 elongation factor Ts [Ensembl]. 0.04 OrthoFinder
AHY40385 tsf, CJ8421_05890 elongation factor Ts [Ensembl]. Elongation factor TS... 0.04 OrthoFinder
AKI49654 tsf, L2625_01767 translation elongation factor Ts (EF-Ts) [Ensembl].... 0.06 OrthoFinder
AKP14989 tsf, WX61_00926 Elongation factor Ts [Ensembl]. Elongation factor TS... 0.06 OrthoFinder
CBI67240 tsf, HPB8_1683 elongation factor EF-Ts [Ensembl]. Elongation factor TS... 0.03 OrthoFinder
CCG26656 No alias Translation elongation factor Ts [Ensembl]. Elongation... 0.04 OrthoFinder
CCL18525 tsf, BN171_2410007 Elongation factor Ts (EF-Ts) [Ensembl]. Elongation... 0.03 OrthoFinder
CCP45691 tsf, Rv2889c Probable elongation factor Tsf (EF-ts) [Ensembl].... 0.02 OrthoFinder
CPC35292 tsf, ERS093114_00167 Translation elongation factor Ts [Ensembl]. Elongation... 0.04 OrthoFinder
CRO13915 tsf Elongation factor Ts [Ensembl]. Elongation factor TS... 0.05 OrthoFinder
KNA52713 VCV51_031517 translation elongation factor Ts [Ensembl]. Elongation... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR014039 Transl_elong_EFTs/EF1B_dimer 71 262
No external refs found!