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CBI65720 (rplB, HPB8_163)


Aliases : rplB, HPB8_163

Description : large subunit ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2 [Interproscan].


Gene families : OG_02_0000653 (OrthoFinder) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CBI65720
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC76342 rplB, b3317 50S ribosomal subunit protein L2 [Ensembl]. Ribosomal... 0.22 OrthoFinder
AAK98995 spr0191, rplB 50S Ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.2 OrthoFinder
AAL22300 STM3437, rplB 50S ribosomal subunit protein L2 [Ensembl]. Ribosomal... 0.23 OrthoFinder
ADK87182 rplB, MPNE_0197 ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2... 0.15 OrthoFinder
AHY40889 rplB, CJ8421_08585 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.27 OrthoFinder
AKI50564 rplB, L2625_02774 ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2,... 0.17 OrthoFinder
AKP15126 rplB, WX61_01072 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.08 OrthoFinder
CCL20566 rplB, BN171_70006 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.2 OrthoFinder
CCP43448 rplB, Rv0704 50S ribosomal protein L2 RplB [Ensembl]. Ribosomal... 0.11 OrthoFinder
CPD13600 rplB, ERS093114_02125 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.23 OrthoFinder
CRO73845 rplB 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.13 OrthoFinder
EDJ91357 CGSHi22421_04618 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.21 OrthoFinder
KNA54975 VCV51_033158 ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2... 0.21 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 126 251
IPR022666 Rbsml_prot_L2_RNA-bd_dom 42 117
UniProtKB D7FC13