CBI66029 (speA, HPB8_472)

Aliases : speA, HPB8_472

Description : arginine decarboxylase [Ensembl]. Pyridoxal-dependent decarboxylase, Arginine decarboxylase helical bundle domain, Arginine decarboxylase C-terminal helical extension [Interproscan].

Gene families : OG_02_0001481 (OrthoFinder) Phylogenetic Tree(s): OG0001481_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CBI66029
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAL21961 STM3086, speA arginine decarboxylase [Ensembl]. Pyridoxal-dependent... 0.02 OrthoFinder
AHY39978 CJ8421_03745 arginine decarboxylase [Ensembl]. Pyridoxal-dependent... 0.07 OrthoFinder
CRO50994 speA Biosynthetic arginine decarboxylase [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR041128 Arg_decarbox_C 561 611
IPR040634 Arg_decarb_HB 359 430
IPR022644 De-COase2_N 71 331
UniProtKB D7FCX2