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Aliases : rpmB, HPB8_676
Description : 50S ribosomal protein L28 [Ensembl]. Ribosomal L28 family [Interproscan].
Gene families : OG_02_0000360 (OrthoFinder) Phylogenetic Tree(s): OG0000360_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CBI66233 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL22587 | STM3728, rpmB | 50S ribosomal subunit protein L28 [Ensembl]. Ribosomal... | 0.02 | OrthoFinder | |
| KNA52491 | VCV51_030149 | ribosomal protein L28 [Ensembl]. Ribosomal L28 family... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003908 | methylated-DNA-[protein]-cysteine S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Enrichment |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Enrichment |
| MF | GO:0004525 | ribonuclease III activity | IEP | Enrichment |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Enrichment |
| CC | GO:0005886 | plasma membrane | IEP | Enrichment |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Enrichment |
| MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | Enrichment |
| MF | GO:0015129 | lactate transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Enrichment |
| MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR026569 | Ribo_L28/L24 | 3 | 60 |
| UniProtKB | D7FDH6 |