AHY40875 (rpsE, CJ8421_08515)

Aliases : rpsE, CJ8421_08515

Description : 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5 [Interproscan].

Gene families : OG_02_0000394 (OrthoFinder) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AHY40875
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAC76328	rpsE, b3303	30S ribosomal subunit protein S5 [Ensembl]. Ribosomal...	0.32	OrthoFinder
AAK99010	spr0206, rpsE	30S Ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.28	OrthoFinder
AAL22286	STM3423, rpsE	30S ribosomal subunit protein S5 [Ensembl]. Ribosomal...	0.41	OrthoFinder
ADK86962	rpsE, MPNE_0211	ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.17	OrthoFinder
AEA92855	rpsE, OG1RF_10168	30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.26	OrthoFinder
AGT22259	N559_0451	30S ribosomal protein S5 [Ensembl]. C-terminal domain,...	0.23	OrthoFinder
AKI50550	rpsE, L2625_02760	ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.17	OrthoFinder
AKP15139	rpsE, WX61_01085	30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.14	OrthoFinder
CBI65734	rpsE, HPB8_177	small subunit ribosomal protein S5 [Ensembl]. Ribosomal...	0.3	OrthoFinder
CCG27396	No alias	SSU ribosomal protein S5p (S2e) [Ensembl]. Ribosomal...	0.18	OrthoFinder
CCL20580	rpsE, BN171_70020	30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.29	OrthoFinder
CCP43465	rpsE, Rv0721	30S ribosomal protein S5 RpsE [Ensembl]. Ribosomal...	0.15	OrthoFinder
CPD14101	rpsE, ERS093114_02139	30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.4	OrthoFinder
CRO74251	rpsE	30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.24	OrthoFinder
EDJ91373	rpsE, CGSHi22421_04698	30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.3	OrthoFinder
KNA54989	VCV51_033172	ribosomal protein S5 [Ensembl]. Ribosomal protein S5...	0.24	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006551	leucine metabolic process	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0009098	leucine biosynthetic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
MF	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005324	Ribosomal_S5_C	85	146
IPR013810	Ribosomal_S5_N	9	73

External Links

No external refs found!

AHY40875 (rpsE, CJ8421_08515)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation