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  5. AGT21930

AGT21930 (N559_0104, EefB)


Aliases : N559_0104, EefB

Description : multidrug efflux permease EefB [Ensembl]. AcrB/AcrD/AcrF family [InterProScan].


Gene families : OG_02_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT21930
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC75137 mdtC, b2076 multidrug efflux system, subunit C [Ensembl].... 0.03 OrthoFinder
AAC76298 acrF, b3266 multidrug efflux system protein [Ensembl].... 0.04 OrthoFinder
AAL21031 STM2127, yegN putative outer membrane receptor [Ensembl].... 0.03 OrthoFinder
AAL21375 STM2481, acrD RND family aminoglycoside/multidrug efflux pump... 0.03 OrthoFinder
AGT25399 N559_3763 putative acridine efflux pump [Ensembl]. AcrB/AcrD/AcrF... 0.06 OrthoFinder
AKP14428 mexB, WX61_00346 Multidrug resistance protein MexB [Ensembl].... 0.02 OrthoFinder
CRN65212 acrB_1 Acriflavine resistance protein B [Ensembl].... 0.03 OrthoFinder
CRO09457 bepE_1 Efflux pump membrane transporter BepE [Ensembl].... 0.02 OrthoFinder
CRO88282 mexB Multidrug-efflux transporter MexB [Ensembl].... 0.02 OrthoFinder
CRP07439 acrB_3 Acriflavine resistance protein B [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 2 1024
No external refs found!