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  5. AHY40890

AHY40890 (rplW, CJ8421_08590)


Aliases : rplW, CJ8421_08590

Description : 50S ribosomal protein L23 [Ensembl]. Ribosomal protein L23 [Interproscan].


Gene families : OG_02_0000400 (OrthoFinder) Phylogenetic Tree(s): OG0000400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY40890
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76343 rplW, b3318 50S ribosomal subunit protein L23 [Ensembl]. Ribosomal... 0.3 OrthoFinder
AAK98994 spr0190, rplW 50S Ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.28 OrthoFinder
AAL22301 STM3438, rplW 50S ribosomal subunit protein L23 [Ensembl]. Ribosomal... 0.36 OrthoFinder
ADK86872 rplW, MPNE_0196 ribosomal protein L23 [Ensembl]. Ribosomal protein L23... 0.16 OrthoFinder
AEA92840 rplW, OG1RF_10153 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
AGT22246 N559_0436 rpL23-SA fusion protein [Ensembl]. 0.17 OrthoFinder
AKI50565 rplW, L2625_02775 ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AKP15125 rplW, WX61_01071 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CBI65719 rplW, HPB8_162 large subunit ribosomal protein L23 [Ensembl]. Ribosomal... 0.25 OrthoFinder
CCG27381 L23Ae LSU ribosomal protein L23p (L23Ae) [Ensembl]. Ribosomal... 0.25 OrthoFinder
CCL20565 rplW, BN171_70005 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
CCP43447 rplW, Rv0703 50S ribosomal protein L23 RplW [Ensembl]. Ribosomal... 0.23 OrthoFinder
CPD13571 rplW, ERS093114_02124 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.3 OrthoFinder
CRO73798 rplW 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.3 OrthoFinder
EDJ91356 rplW, CGSHi22421_04613 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
KNA54974 VCV51_033157 ribosomal protein L23 [Ensembl]. Ribosomal protein L23... 0.23 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013025 Ribosomal_L25/23 8 88
No external refs found!