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  5. AHY40891

AHY40891 (rplD, CJ8421_08595)


Aliases : rplD, CJ8421_08595

Description : 50S ribosomal protein L4 [Ensembl]. Ribosomal protein L4/L1 family [Interproscan].


Gene families : OG_02_0000487 (OrthoFinder) Phylogenetic Tree(s): OG0000487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY40891
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76344 rplD, b3319 50S ribosomal subunit protein L4 [Ensembl]. Ribosomal... 0.28 OrthoFinder
AAK98993 spr0189, rplD 50S Ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
AAL22302 STM3439, rplD 50S ribosomal subunit protein L4 [Ensembl]. Ribosomal... 0.33 OrthoFinder
AEA92839 rplD, OG1RF_10152 ribosomal protein L4/L1 family protein [Ensembl].... 0.26 OrthoFinder
AGT22245 N559_0435 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder
AKI50566 rplD, L2625_02776 ribosomal protein L4 [Ensembl]. Ribosomal protein L4/L1e... 0.13 OrthoFinder
AKP15124 rplD, WX61_01070 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CBI65718 rplD, HPB8_161 large subunit ribosomal protein L4 [Ensembl]. Ribosomal... 0.07 OrthoFinder
CCG27380 No alias LSU ribosomal protein L4p (L1e) [Ensembl]. Ribosomal... 0.16 OrthoFinder
CCL20564 rplD, BN171_70004 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
CCP43446 rplD, Rv0702 50S ribosomal protein L4 RplD [Ensembl]. Ribosomal... 0.14 OrthoFinder
CPD13539 rplD, ERS093114_02123 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
CRO73766 rplD 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
EDJ91355 rplD, CGSHi22421_04608 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
KNA54973 VCV51_033156 ribosomal protein L4/L1 family protein [Ensembl].... 0.24 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002136 Ribosomal_L4/L1e 24 202
No external refs found!