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  5. AGT22192

AGT22192 (N559_0379)


Aliases : N559_0379

Description : osmolarity response regulator [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22192
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.03 OrthoFinder
AAL22364 STM3502, ompR response regulator in two-component regulatory system... 0.06 OrthoFinder
AAL23116 STM4292, basR response regulator in two-component regulatory system... 0.04 OrthoFinder
CCG26924 No alias Two-component system response regulator [Ensembl].... 0.03 OrthoFinder
CCL18125 kdpE, BN171_2100009 Two-component response regulator KdpE [Ensembl].... 0.02 OrthoFinder
CCL18738 BN171_260007 Two-component response regulator [Ensembl]. Response... 0.05 OrthoFinder
CCL20055 BN171_3670038 Two-component response regulator, CheY family [Ensembl].... 0.03 OrthoFinder
CCL20132 BN171_370006 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL20251 BN171_390005 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.02 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.02 OrthoFinder
CPC86428 phoP, ERS093114_01516 Alkaline phosphatase synthesis transcriptional... 0.03 OrthoFinder
CRO26486 cheY_1 Chemotaxis protein CheY [Ensembl]. Response regulator... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.02 OrthoFinder
EDJ90537 CGSHi22421_03168 phosphate regulon transcriptional regulatory protein... 0.03 OrthoFinder
KNA52268 VCV51_033433 response regulator receiver domain-containing protein... 0.03 OrthoFinder
KNA58243 VCV51_032751 response regulator receiver domain-containing protein... 0.03 OrthoFinder
KNA60550 VCV51_032221 response regulator receiver domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 7 117
IPR001867 OmpR/PhoB-type_DNA-bd 157 232
No external refs found!