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  5. AGT22376

AGT22376 (N559_0578)


Aliases : N559_0578

Description : 23S rRNA methyltransferase J [Ensembl]. Ribosomal RNA methyltransferase FtsJ domain [InterProScan].


Gene families : OG_02_0001669 (OrthoFinder) Phylogenetic Tree(s): OG0001669_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22376
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAC76211 rlmE, b3179 23S rRNA U2552 2'-O-ribose methyltransferase,... 0.04 OrthoFinder
AAL22167 STM3297, ftsJ 23S rRNA methyltransferase [Ensembl]. FtsJ-like... 0.06 OrthoFinder
AKP15759 rlmE, WX61_01724 Ribosomal RNA large subunit methyltransferase E... 0.02 OrthoFinder
EDJ91116 CGSHi22421_10257 ribosomal RNA large subunit methyltransferase J... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0032259 methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002877 rRNA_MeTrfase_FtsJ_dom 31 206
No external refs found!