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Aliases : N559_0667, LsrB
Description : autoinducer 2 ABC transporter, periplasmic substrate-binding protein LsrB [Ensembl]. Periplasmic binding protein domain [InterProScan].
Gene families : OG_02_0003504 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AGT22463 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC74589 | lsrB, b1516 | autoinducer 2-binding protein [Ensembl]. Periplasmic... | 0.14 | OrthoFinder | |
| AAL22917 | STM4077, yneA | putative sugar transport protein [Ensembl]. Periplasmic... | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0006011 | UDP-glucose metabolic process | IEP | Enrichment |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Enrichment |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Enrichment |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Enrichment |
| BP | GO:0006879 | cellular iron ion homeostasis | IEP | Enrichment |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Enrichment |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | Enrichment |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Enrichment |
| BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
| CC | GO:0019867 | outer membrane | IEP | Enrichment |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Enrichment |
| BP | GO:0030243 | cellulose metabolic process | IEP | Enrichment |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Enrichment |
| BP | GO:0044042 | glucan metabolic process | IEP | Enrichment |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0048878 | chemical homeostasis | IEP | Enrichment |
| BP | GO:0050801 | ion homeostasis | IEP | Enrichment |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Enrichment |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Enrichment |
| BP | GO:0055065 | metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055072 | iron ion homeostasis | IEP | Enrichment |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055080 | cation homeostasis | IEP | Enrichment |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Enrichment |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025997 | SBP_2_dom | 23 | 278 |
| No external refs found! |