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  5. AGT22497

AGT22497 (N559_0702)


Aliases : N559_0702

Description : ribosomal protein S21 [Ensembl].


Gene families : OG_02_0000673 (OrthoFinder) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22497
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76101 rpsU, b3065 30S ribosomal subunit protein S21 [Ensembl]. Ribosomal... 0.08 OrthoFinder
AAL22083 STM3209, rpsU 30S ribosomal subunit protein S21 [Ensembl]. Ribosomal... 0.05 OrthoFinder
AEA94535 rpsU, OG1RF_11848 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CRO83709 rpsU 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
KNA49206 VCV51_033802 ribosomal protein S21 [Ensembl]. Ribosomal protein S21... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006276 plasmid maintenance IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 4 56
No external refs found!