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  5. AGT22672

AGT22672 (N559_0884, MscS)


Aliases : N559_0884, MscS

Description : mechanosensitive channel MscS [Ensembl].


Gene families : OG_02_0000099 (OrthoFinder) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22672
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AAL22942 STM4102 putative inner membrane protein [Ensembl]. Conserved TM... 0.04 OrthoFinder
CCL20274 BN171_40002 Putative mechanosensitive ion channel protein [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0008914 leucyltransferase activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009246 enterobacterial common antigen biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0036065 fucosylation IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0046378 enterobacterial common antigen metabolic process IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR006685 MscS_channel 72 268
IPR008910 TM_helix 15 64
No external refs found!