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  5. AGT22735

AGT22735 (N559_0948)


Aliases : N559_0948

Description : major type 1 subunit fimbrin (pilin) [Ensembl]. Fimbrial-type adhesion domain [InterProScan].


Gene families : OG_02_0000602 (OrthoFinder) Phylogenetic Tree(s): OG0000602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22735
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AAC77270 fimA, b4314 major type 1 subunit fimbrin (pilin) [Ensembl]. Fimbrial... 0.14 OrthoFinder
AGT25493 N559_3857 fimbrial protein [Ensembl]. 0.07 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007155 cell adhesion IEA Interproscan
CC GO:0009289 pilus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015159 polysaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0015774 polysaccharide transport IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
InterPro domains Description Start Stop
IPR000259 Adhesion_dom_fimbrial 34 181
No external refs found!