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  5. AGT22923

AGT22923 (N559_1154)


Aliases : N559_1154

Description : iron transport system inner membrane permease component [Ensembl]. ABC 3 transport family [InterProScan].


Gene families : OG_02_0000141 (OrthoFinder) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22923
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC74929 znuB, b1859 zinc ABC transporter permease [Ensembl]. ABC 3 transport... 0.01 OrthoFinder
AAL00297 spr1493, psaC ABC transporter membrane-spanning permease-manganese... 0.03 OrthoFinder
AAL21743 STM2863, sitC fur regulated Salmonella iron transporter [Ensembl]. ABC... 0.14 OrthoFinder
AAL21744 STM2864, sitD fur regulated Salmonella iron transporter [Ensembl]. ABC... 0.14 OrthoFinder
AEA92740 zurM, OG1RF_10053 metal cation ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA94365 OG1RF_11678 ABC superfamily ATP binding cassette transporter,... 0.03 OrthoFinder
AKP15480 mntB, WX61_01434 Manganese transport system membrane protein MntB... 0.02 OrthoFinder
CPC53217 sitD, ERS093114_00721 Manganese ABC transporter%2C inner membrane permease... 0.05 OrthoFinder
CRO76540 znuB_1 High-affinity zinc uptake system membrane protein ZnuB... 0.02 OrthoFinder
EDJ90087 CGSHi22421_06573 iron (chelated) ABC transporter permease protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
MF GO:0008914 leucyltransferase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR001626 ABC_TroCD 10 264
No external refs found!