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  5. AGT22969

AGT22969 (N559_1203)


Aliases : N559_1203

Description : putative ABC transport system permease component [Ensembl]. ABC 3 transport family [InterProScan].


Gene families : OG_02_0000141 (OrthoFinder) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22969
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC74929 znuB, b1859 zinc ABC transporter permease [Ensembl]. ABC 3 transport... 0.08 OrthoFinder
AAL00297 spr1493, psaC ABC transporter membrane-spanning permease-manganese... 0.02 OrthoFinder
AAL21743 STM2863, sitC fur regulated Salmonella iron transporter [Ensembl]. ABC... 0.03 OrthoFinder
AAL21744 STM2864, sitD fur regulated Salmonella iron transporter [Ensembl]. ABC... 0.03 OrthoFinder
AEA92740 zurM, OG1RF_10053 metal cation ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA94365 OG1RF_11678 ABC superfamily ATP binding cassette transporter,... 0.03 OrthoFinder
AKI48124 L2625_00151 zinc ABC transporter, permease protein [Ensembl]. ABC... 0.06 OrthoFinder
AKI49843 mntC, L2625_01990 manganese ABC transporter, permease protein [Ensembl].... 0.05 OrthoFinder
CRO76540 znuB_1 High-affinity zinc uptake system membrane protein ZnuB... 0.08 OrthoFinder
CRP72736 znuB_2 High-affinity zinc uptake system membrane protein ZnuB... 0.06 OrthoFinder
EDJ90086 CGSHi22421_06568 iron (chelated) ABC transporter permease protein... 0.02 OrthoFinder
EDJ90087 CGSHi22421_06573 iron (chelated) ABC transporter permease protein... 0.03 OrthoFinder
KNA59605 VCV51_031395 zinc ABC transporter permease [Ensembl]. ABC 3 transport... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004474 malate synthase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006097 glyoxylate cycle IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008772 [isocitrate dehydrogenase (NADP+)] kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046487 glyoxylate metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
InterPro domains Description Start Stop
IPR001626 ABC_TroCD 13 272
No external refs found!