AGT23032 (N559_1268, MarA)

Aliases : N559_1268, MarA

Description : multiple antibiotic resistance protein MarA [Ensembl]. Helix-turn-helix domain, DNA binding HTH domain [InterProScan].

Gene families : OG_02_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT23032
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
AAC76887	rhaS, b3905	transcriptional activator of rhaBAD and rhaT [Ensembl]....	0.02	OrthoFinder
AAL19317	STM0363	putative transcription regulator, AraC family [Ensembl]....	0.07	OrthoFinder
AKP15343	pchR, WX61_01295	Regulatory protein PchR [Ensembl]. Helix-turn-helix...	0.02	OrthoFinder
CRN90472	btr_2	Bacillibactin transport regulator [Ensembl]....	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004803	transposase activity	IEP	Enrichment
CC	GO:0005887	integral component of plasma membrane	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006310	DNA recombination	IEP	Enrichment
BP	GO:0006313	transposition, DNA-mediated	IEP	Enrichment
BP	GO:0006790	sulfur compound metabolic process	IEP	Enrichment
BP	GO:0008152	metabolic process	IEP	Enrichment
BP	GO:0008272	sulfate transport	IEP	Enrichment
MF	GO:0008759	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity	IEP	Enrichment
MF	GO:0008914	leucyltransferase activity	IEP	Enrichment
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Enrichment
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
BP	GO:0015074	DNA integration	IEP	Enrichment
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Enrichment
MF	GO:0016755	aminoacyltransferase activity	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
MF	GO:0019213	deacetylase activity	IEP	Enrichment
BP	GO:0030163	protein catabolic process	IEP	Enrichment
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Enrichment
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Enrichment
BP	GO:0032196	transposition	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment
BP	GO:0043170	macromolecule metabolic process	IEP	Enrichment
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
BP	GO:0072348	sulfur compound transport	IEP	Enrichment
BP	GO:0090304	nucleic acid metabolic process	IEP	Enrichment
CC	GO:0098533	ATPase dependent transmembrane transport complex	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment
CC	GO:0098797	plasma membrane protein complex	IEP	Enrichment
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Enrichment
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Enrichment
CC	GO:1902495	transmembrane transporter complex	IEP	Enrichment
CC	GO:1904949	ATPase complex	IEP	Enrichment
CC	GO:1990351	transporter complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR018060	HTH_AraC	28	106

External Links

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AGT23032 (N559_1268, MarA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation