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  5. AGT23098

AGT23098 (N559_1336)


Aliases : N559_1336

Description : sigma-54 modulation protein [Ensembl].


Gene families : OG_02_0000405 (OrthoFinder) Phylogenetic Tree(s): OG0000405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23098
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AAC75646 raiA, b2597 cold shock protein associated with 30S ribosomal subunit... 0.11 OrthoFinder
AAC76235 hpf, b3203 ribosome hibernation promoting factor HPF; stabilizes... 0.06 OrthoFinder
AAL00813 spr2011 Conserved hypothetical protein [Ensembl]. Sigma 54... 0.03 OrthoFinder
AAL21554 STM2665, yfiA ribosome associated factor [Ensembl]. Sigma 54... 0.08 OrthoFinder
AAL22190 STM3321, yhbH putative sigma N modulation factor [Ensembl]. Sigma 54... 0.06 OrthoFinder
KNA55034 VCV51_031707 sigma 54 modulation protein/S30EA ribosomal protein... 0.03 OrthoFinder
KNA57477 VCV51_032853 sigma 54 modulation protein/S30EA ribosomal protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0044238 primary metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0010565 regulation of cellular ketone metabolic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019216 regulation of lipid metabolic process IEP Enrichment
BP GO:0019217 regulation of fatty acid metabolic process IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0062012 regulation of small molecule metabolic process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR003489 RHF/RaiA 2 89
No external refs found!