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  5. AGT23206

AGT23206 (N559_1451)


Aliases : N559_1451

Description : aminoglycoside/multidrug efflux system [Ensembl]. AcrB/AcrD/AcrF family [InterProScan].


Gene families : OG_02_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23206
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AKP14428 mexB, WX61_00346 Multidrug resistance protein MexB [Ensembl].... 0.02 OrthoFinder
CRN65212 acrB_1 Acriflavine resistance protein B [Ensembl].... 0.06 OrthoFinder
CRO09457 bepE_1 Efflux pump membrane transporter BepE [Ensembl].... 0.05 OrthoFinder
CRO88282 mexB Multidrug-efflux transporter MexB [Ensembl].... 0.03 OrthoFinder
CRP58341 mdtB_2 Multidrug transporter MdtB [Ensembl]. AcrB/AcrD/AcrF... 0.05 OrthoFinder
CRP65676 bepE_3 Efflux pump membrane transporter BepE [Ensembl].... 0.03 OrthoFinder
EDJ91679 CGSHi22421_07988 predicted cation/multidrug efflux pump [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 1 1027
No external refs found!