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  5. AGT23236

AGT23236 (N559_1483)


Aliases : N559_1483

Description : sulfate/thiosulfate transporter subunit [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000082 (OrthoFinder) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23236
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC75476 cysW, b2423 sulfate/thiosulfate ABC transporter permease [Ensembl].... 0.16 OrthoFinder
AAC75477 cysU, b2424 sulfate/thiosulfate ABC transporter permease [Ensembl].... 0.15 OrthoFinder
AAK99024 spr0220, ABC-MSP ABC transporter membrane-spanning permease-iron... 0.04 OrthoFinder
AAL21336 STM2442, cysW thiosulfate permease W protein [Ensembl].... 0.18 OrthoFinder
AAL21337 STM2443, cysU thiosulfate transport protein [Ensembl].... 0.2 OrthoFinder
AGT23916 N559_2204 putative inner membrane permease of ABC transporter... 0.03 OrthoFinder
CCP45188 cysW, Rv2398c Probable sulfate-transport integral membrane protein ABC... 0.04 OrthoFinder
CRO34866 cysW_1 Sulfate transport system permease protein CysW... 0.05 OrthoFinder
CRO34896 cysT_1 Sulfate transport system permease protein CysT... 0.1 OrthoFinder
EDJ90327 modB, CGSHi22421_02326 molybdate ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
KNA49224 VCV51_030344 sulfate ABC transporter [Ensembl].... 0.1 OrthoFinder
KNA49225 VCV51_030345 sulfate ABC transporter [Ensembl].... 0.1 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 76 274
No external refs found!