Coexpression cluster: Cluster_11 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 cellular amino acid metabolic process 12.05% (20/166) 3.1 0.0 0.0
GO:0008652 cellular amino acid biosynthetic process 7.83% (13/166) 4.13 0.0 0.0
GO:0016053 organic acid biosynthetic process 8.43% (14/166) 3.76 0.0 0.0
GO:0046394 carboxylic acid biosynthetic process 7.83% (13/166) 3.8 0.0 0.0
GO:0043436 oxoacid metabolic process 12.05% (20/166) 2.66 0.0 0.0
GO:0019752 carboxylic acid metabolic process 12.05% (20/166) 2.66 0.0 0.0
GO:0006082 organic acid metabolic process 12.05% (20/166) 2.59 0.0 0.0
GO:1901605 alpha-amino acid metabolic process 6.63% (11/166) 3.66 0.0 0.0
GO:0006547 histidine metabolic process 3.61% (6/166) 4.95 0.0 0.0
GO:0000105 histidine biosynthetic process 3.61% (6/166) 4.95 0.0 0.0
GO:0044283 small molecule biosynthetic process 8.43% (14/166) 2.72 0.0 0.0
GO:1901607 alpha-amino acid biosynthetic process 4.22% (7/166) 4.18 0.0 0.0
GO:0000096 sulfur amino acid metabolic process 3.61% (6/166) 4.54 0.0 1e-06
GO:0006790 sulfur compound metabolic process 4.22% (7/166) 3.44 2e-06 3.1e-05
GO:0044281 small molecule metabolic process 12.05% (20/166) 1.72 2e-06 3.2e-05
GO:0009066 aspartate family amino acid metabolic process 2.41% (4/166) 4.15 3.4e-05 0.000399
GO:0050667 homocysteine metabolic process 1.81% (3/166) 4.95 3.3e-05 0.000407
GO:0009084 glutamine family amino acid biosynthetic process 1.81% (3/166) 4.95 3.3e-05 0.000407
GO:0009092 homoserine metabolic process 1.81% (3/166) 4.95 3.3e-05 0.000407
GO:0019346 transsulfuration 1.81% (3/166) 4.95 3.3e-05 0.000407
GO:1901566 organonitrogen compound biosynthetic process 8.43% (14/166) 1.83 3.2e-05 0.00049
GO:0036094 small molecule binding 16.27% (27/166) 1.17 4.7e-05 0.000522
GO:0019842 vitamin binding 4.82% (8/166) 2.46 7.8e-05 0.00083
GO:0006534 cysteine metabolic process 1.81% (3/166) 4.54 0.000129 0.001271
GO:0006555 methionine metabolic process 1.81% (3/166) 4.54 0.000129 0.001271
GO:1901564 organonitrogen compound metabolic process 12.05% (20/166) 1.3 0.000142 0.001346
GO:0009058 biosynthetic process 11.45% (19/166) 1.29 0.000242 0.002206
GO:0055085 transmembrane transport 15.06% (25/166) 1.05 0.000326 0.002673
GO:0009067 aspartate family amino acid biosynthetic process 1.81% (3/166) 4.22 0.000315 0.002674
GO:0009069 serine family amino acid metabolic process 1.81% (3/166) 4.22 0.000315 0.002674
GO:0043168 anion binding 13.86% (23/166) 1.09 0.00041 0.003255
GO:0070279 vitamin B6 binding 3.61% (6/166) 2.45 0.000657 0.004752
GO:0030170 pyridoxal phosphate binding 3.61% (6/166) 2.45 0.000657 0.004752
GO:0043167 ion binding 16.27% (27/166) 0.94 0.000631 0.004854
GO:0044272 sulfur compound biosynthetic process 1.81% (3/166) 3.73 0.001052 0.006634
GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 1.2% (2/166) 4.95 0.001037 0.00671
GO:0009086 methionine biosynthetic process 1.2% (2/166) 4.95 0.001037 0.00671
GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 1.2% (2/166) 4.95 0.001037 0.00671
GO:0044249 cellular biosynthetic process 9.04% (15/166) 1.31 0.000991 0.006968
GO:1901576 organic substance biosynthetic process 9.04% (15/166) 1.24 0.001515 0.009317
GO:0009987 cellular process 28.92% (48/166) 0.57 0.001793 0.010757
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 3.01% (5/166) 2.42 0.002092 0.012253
GO:0000097 sulfur amino acid biosynthetic process 1.2% (2/166) 4.37 0.003043 0.017411
GO:0009064 glutamine family amino acid metabolic process 1.81% (3/166) 3.22 0.003356 0.018764
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 3.01% (5/166) 2.23 0.003768 0.020596
GO:0016887 ATPase 6.02% (10/166) 1.26 0.008435 0.045111
GO:0016879 ligase activity, forming carbon-nitrogen bonds 1.81% (3/166) 2.73 0.009257 0.048453
GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer 1.2% (2/166) 3.63 0.009719 0.048795
GO:0008172 S-methyltransferase activity 1.2% (2/166) 3.63 0.009719 0.048795
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_9 0.034 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_11 0.06 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.032 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_14 0.034 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_20 0.041 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_27 0.045 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.029 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_19 0.027 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_26 0.029 OrthoFinder Compare
Escherichia coli HCCA Cluster_2 0.038 OrthoFinder Compare
Escherichia coli HCCA Cluster_7 0.085 OrthoFinder Compare
Escherichia coli HCCA Cluster_10 0.028 OrthoFinder Compare
Escherichia coli HCCA Cluster_11 0.155 OrthoFinder Compare
Escherichia coli HCCA Cluster_18 0.059 OrthoFinder Compare
Escherichia coli HCCA Cluster_30 0.041 OrthoFinder Compare
Escherichia coli HCCA Cluster_32 0.047 OrthoFinder Compare
Escherichia coli HCCA Cluster_37 0.092 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_3 0.063 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_5 0.028 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_8 0.039 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_11 0.04 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_2 0.047 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_3 0.035 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_5 0.047 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_9 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_16 0.027 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_22 0.046 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_23 0.031 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_30 0.047 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_32 0.04 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_6 0.044 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_10 0.036 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_15 0.063 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_2 0.03 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_7 0.028 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.043 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_1 0.048 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_11 0.031 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_12 0.035 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_17 0.065 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_19 0.043 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_24 0.038 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_31 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_33 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_35 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_38 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_39 0.038 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_47 0.05 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_48 0.038 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_54 0.028 OrthoFinder Compare
Salmonella enterica HCCA Cluster_2 0.063 OrthoFinder Compare
Salmonella enterica HCCA Cluster_5 0.029 OrthoFinder Compare
Salmonella enterica HCCA Cluster_10 0.201 OrthoFinder Compare
Salmonella enterica HCCA Cluster_15 0.033 OrthoFinder Compare
Salmonella enterica HCCA Cluster_38 0.034 OrthoFinder Compare
Salmonella enterica HCCA Cluster_39 0.162 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_1 0.124 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_7 0.029 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_11 0.042 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_25 0.056 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_1 0.032 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_11 0.027 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_18 0.027 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_10 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_2 0.087 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_5 0.052 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_10 0.061 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_14 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_16 0.032 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_25 0.057 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_28 0.065 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_29 0.037 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_37 0.034 OrthoFinder Compare
Sequences (166) (download table)

InterPro Domains

GO Terms

Family Terms