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  5. CCL17024

CCL17024 (oppA, BN171_1090005)


Aliases : oppA, BN171_1090005

Description : ABC-type transport system, oligopeptide-family extracellular solute-binding protein [Ensembl]. Bacterial extracellular solute-binding proteins [Interproscan].


Gene families : OG_02_0000055 (OrthoFinder) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17024
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AAC74376 sapA, b1294 antimicrobial peptide transport ABC transporter... 0.07 OrthoFinder
AAC76501 nikA, b3476 nickel/heme ABC transporter periplasmic binding protein... 0.03 OrthoFinder
AAC76569 dppA, b3544 dipeptide/heme ABC transporter periplasmic binding... 0.08 OrthoFinder
AAL20181 STM1255 putative ABC transporter periplasmic binding protein... 0.03 OrthoFinder
AAL20609 STM1692, sapA ABC superfamily peptide transport protein [Ensembl].... 0.02 OrthoFinder
AAL22491 STM3630, dppA dipeptide transport protein [Ensembl]. Bacterial... 0.04 OrthoFinder
AEA95053 opp2A, OG1RF_12366 peptide ABC superfamily ATP binding cassette... 0.06 OrthoFinder
AGT22073 N559_0251 periplasmic dipeptide transport protein precursor... 0.06 OrthoFinder
AGT22123 N559_0304 nickel ABC transporter, periplasmic nickel-binding... 0.03 OrthoFinder
AGT23463 N559_1721 putative ABC transport system periplasmic binding... 0.08 OrthoFinder
AGT24069 N559_2370 dipeptide transport protein [Ensembl]. Solute-binding... 0.04 OrthoFinder
AGT25119 N559_3468 peptide ABC transporter periplasmic substrate-binding... 0.04 OrthoFinder
AGT25383 N559_3745 putative ABC transport system periplasmic dipeptide... 0.04 OrthoFinder
AKI48107 L2625_00134 oligopeptide ABC transporter, oligopeptide-binding... 0.04 OrthoFinder
CCL19134 appA, BN171_2880001 ABC-type transport system, oligopeptide-family... 0.04 OrthoFinder
CPC43753 oppA_1, ERS093114_00438 Oligopeptide ABC transporter%2C periplasmic... 0.04 OrthoFinder
CPC72064 nikA, ERS093114_01157 peptide ABC transporter peptide-binding protein... 0.05 OrthoFinder
CPD17760 opp-1A, ERS093114_02216 Oligopeptide transporter putative substrate binding... 0.04 OrthoFinder
CRO28120 dppA_1 Dipeptide-binding protein [Ensembl]. Bacterial... 0.03 OrthoFinder
CRO32936 hbpA Hemin-binding lipoprotein [Ensembl]. Bacterial... 0.03 OrthoFinder
CRP12075 dppA_4 Dipeptide-binding protein [Ensembl]. Bacterial... 0.07 OrthoFinder
CRP12127 dppA_5 Dipeptide-binding protein [Ensembl]. Bacterial... 0.06 OrthoFinder
EDJ90884 CGSHi22421_03508 ABC-type transport system, periplasmic component,... 0.03 OrthoFinder
KNA51873 VCV51_030403 bacterial extracellular solute-binding protein, family 5... 0.05 OrthoFinder
KNA52458 VCV51_030122 bacterial extracellular solute-binding protein, family 5... 0.03 OrthoFinder
KNA58587 VCV51_031120 bacterial extracellular solute-binding protein, family 5... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008907 integrase activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000914 SBP_5_dom 76 437
UniProtKB U3WTJ0