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Aliases : N559_1869
Description : putative oligogalacturonide transporter [Ensembl].
Gene families : OG_02_0000980 (OrthoFinder) Phylogenetic Tree(s): OG0000980_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AGT23602 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL19113 | STM0149 | putative permease of the Na+:galactoside symporter... | 0.04 | OrthoFinder | |
| AGT21952 | N559_0126 | putative transporter [Ensembl]. | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Enrichment |
| BP | GO:0006063 | uronic acid metabolic process | IEP | Enrichment |
| BP | GO:0006064 | glucuronate catabolic process | IEP | Enrichment |
| MF | GO:0008880 | glucuronate isomerase activity | IEP | Enrichment |
| MF | GO:0008927 | mannonate dehydratase activity | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0010393 | galacturonan metabolic process | IEP | Enrichment |
| BP | GO:0016054 | organic acid catabolic process | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Enrichment |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Enrichment |
| MF | GO:0016853 | isomerase activity | IEP | Enrichment |
| MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Enrichment |
| BP | GO:0019585 | glucuronate metabolic process | IEP | Enrichment |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| BP | GO:0045488 | pectin metabolic process | IEP | Enrichment |
| BP | GO:0045490 | pectin catabolic process | IEP | Enrichment |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Enrichment |
| MF | GO:0047487 | oligogalacturonide lyase activity | IEP | Enrichment |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |