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  5. AGT23682

AGT23682 (N559_1950)


Aliases : N559_1950

Description : hypothetical protein [Ensembl].


Gene families : OG_02_0004883 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23682
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAL20723 STM1808 putative cytoplasmic protein [Ensembl]. Domain of... 0.16 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006063 uronic acid metabolic process IEP Enrichment
BP GO:0006064 glucuronate catabolic process IEP Enrichment
MF GO:0008880 glucuronate isomerase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0010393 galacturonan metabolic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019585 glucuronate metabolic process IEP Enrichment
BP GO:0045488 pectin metabolic process IEP Enrichment
BP GO:0045490 pectin catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0047487 oligogalacturonide lyase activity IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR015392 DUF1971 14 94
No external refs found!