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  5. CCL17057

CCL17057 (cspA, BN171_1130011)


Aliases : cspA, BN171_1130011

Description : Cold shock protein [Ensembl]. 'Cold-shock' DNA-binding domain [Interproscan].


Gene families : OG_02_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17057
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC73724 cspE, b0623 constitutive cold shock family transcription... 0.03 OrthoFinder
AAC74893 cspC, b1823 stress protein, member of the CspA-family [Ensembl].... 0.01 OrthoFinder
AAC76580 cspA, b3556 RNA chaperone and antiterminator, cold-inducible... 0.04 OrthoFinder
AGT22053 N559_0231 major cold shock protein [Ensembl]. 'Cold-shock'... 0.03 OrthoFinder
AKP15786 cspD, WX61_01751 Cold shock-like protein CspD [Ensembl]. 'Cold-shock'... 0.03 OrthoFinder
CPC31752 cspA, ERS093114_00015 CSD family cold shock protein [Ensembl]. 'Cold-shock'... 0.05 OrthoFinder
CRP63148 cspA_4 Major cold shock protein CspA [Ensembl]. 'Cold-shock'... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005275 amine transmembrane transporter activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
MF GO:0015101 organic cation transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0015665 alcohol transmembrane transporter activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0034228 ethanolamine transmembrane transporter activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 3 65
UniProtKB U3WS29