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  5. AGT23826

AGT23826 (N559_2108)


Aliases : N559_2108

Description : integration host factor subunit alpha [Ensembl].


Gene families : OG_02_0000100 (OrthoFinder) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23826
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AKP14186 ihfB, WX61_00097 Integration host factor subunit beta [Ensembl].... 0.02 OrthoFinder
EDJ91566 nudC, CGSHi22421_07342 NADH pyrophosphatase [Ensembl]. Bacterial DNA-binding... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0001216 DNA-binding transcription activator activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019627 urea metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
BP GO:0043419 urea catabolic process IEP Enrichment
BP GO:0043605 cellular amide catabolic process IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
MF GO:0043772 acyl-phosphate glycerol-3-phosphate acyltransferase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0051262 protein tetramerization IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
BP GO:0071941 nitrogen cycle metabolic process IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000119 Hist_DNA-bd 3 91
No external refs found!