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  5. AGT23930

AGT23930 (N559_2218)


Aliases : N559_2218

Description : subunit of heme lyase [Ensembl].


Gene families : OG_02_0000892 (OrthoFinder) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23930
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AAC75254 ccmH, b2194 heme lyase, CcmH subunit [Ensembl]. Cytochrome C... 0.17 OrthoFinder
AAL21149 STM2247, ccmH putative heme lyase subunit [Ensembl]. Cytochrome C... 0.12 OrthoFinder
CRP40950 ccmH Cytochrome c-type biogenesis protein CcmH precursor... 0.06 OrthoFinder
EDJ91732 CGSHi22421_08253 cytochrome C-type biogenesis protein [Ensembl].... 0.05 OrthoFinder
EDJ91891 CGSHi22421_09048 cytochrome C-type biogenesis protein [Ensembl].... 0.06 OrthoFinder
EDJ91892 CGSHi22421_09053 TPR-repeat-containing protein [Ensembl]. 0.08 OrthoFinder
KNA59636 VCV51_032536 cytochrome C biogenesis protein [Ensembl]. Cytochrome C... 0.1 OrthoFinder
KNA59637 VCV51_031375, CcmI cytochrome c-type biogenesis protein CcmI [Ensembl]. 0.12 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0015232 heme transmembrane transporter activity IEP Enrichment
BP GO:0015886 heme transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
BP GO:0017003 protein-heme linkage IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0017006 protein-tetrapyrrole linkage IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901678 iron coordination entity transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!