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  5. AGT23970

AGT23970 (N559_2267)


Aliases : N559_2267

Description : oligopeptide ABC transport system permease component [Ensembl]. N-terminal TM domain of oligopeptide transport permease C, transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23970
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AAC73919 gsiD, b0832 glutathione ABC transporter permease [Ensembl].... 0.06 OrthoFinder
AAC74327 oppC, b1245 oligopeptide ABC transporter permease [Ensembl].... 0.08 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.09 OrthoFinder
AAC74558 ddpC, b1485 D,D-dipeptide ABC transporter permease [Ensembl].... 0.06 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.06 OrthoFinder
AAL00508 spr1705, amiD ABC transporter membrane-spanning permease-oligopeptide... 0.06 OrthoFinder
AAL20662 STM1744, oppC oligopeptide transport protein [Ensembl]. N-terminal TM... 0.04 OrthoFinder
AEA93324 opp1C, OG1RF_10637 oligopeptide ABC superfamily ATP binding cassette... 0.04 OrthoFinder
AEA95054 opp2C, OG1RF_12367 ABC superfamily ATP binding cassette transporter, ABC... 0.07 OrthoFinder
AGT22075 N559_0253 dipeptide transporter [Ensembl]. N-terminal TM domain of... 0.05 OrthoFinder
AGT23465 N559_1723 ABC transporter permease [Ensembl]. N-terminal TM domain... 0.05 OrthoFinder
AGT24649 N559_2985 peptide transport permease protein [Ensembl]. N-terminal... 0.04 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
AKI50192 oppC, L2625_02358 oligopeptide ABC transporter, permease protein... 0.02 OrthoFinder
CBI66819 dppC, HPB8_1262 dipeptide ABC transporter, permease protein (DppC)... 0.05 OrthoFinder
CCG26342 OppC Oligopeptide transport system permease protein OppC (TC... 0.05 OrthoFinder
CCG26947 DppC Dipeptide transport system permease protein DppC (TC... 0.02 OrthoFinder
CPC32230 gsiD_1, ERS093114_00036 nickel transport system permease protein [Ensembl].... 0.05 OrthoFinder
CPC43619 oppC_1, ERS093114_00434 Oligopeptide transport system permease protein oppC... 0.02 OrthoFinder
CPC43895 oppC_2, ERS093114_00442 Oligopeptide transport system permease protein oppC... 0.1 OrthoFinder
CPC72124 opp-3C, ERS093114_01159 oligopeptide permease%2C channel-forming protein... 0.04 OrthoFinder
CPC95740 gsiD_2, ERS093114_01724 Oligopeptide transport system permease protein... 0.04 OrthoFinder
CPD17831 opp-1C, ERS093114_02218 Oligopeptide transporter putative membrane permease... 0.05 OrthoFinder
CRO33006 gsiD Glutathione transport system permease protein GsiD... 0.02 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.06 OrthoFinder
EDJ90655 CGSHi22421_04078 dipeptide transport system permease protein [Ensembl].... 0.03 OrthoFinder
EDJ90882 CGSHi22421_03498 peptide ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
EDJ91925 oppD, CGSHi22421_09218 oligopeptide transporter ATP-binding component... 0.04 OrthoFinder
KNA51871 VCV51_030401 binding-protein-dependent transport system inner... 0.05 OrthoFinder
KNA54679 VCV51_030765 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR025966 OppC_N 27 79
IPR000515 MetI-like 120 312
No external refs found!