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  5. AGT24089

AGT24089 (N559_2392)


Aliases : N559_2392

Description : ABC transporter, permease protein [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24089
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AAC73754 gltK, b0653 glutamate/aspartate ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC73949 artQ, b0862 arginine ABC transporter permease [Ensembl].... 0.06 OrthoFinder
AAC74985 tcyL, b1918 ABC family putative inner membrane permease [Ensembl].... 0.04 OrthoFinder
AAK99213 spr0409, glnH ABC transporter substrate binding protein-glutamine... 0.02 OrthoFinder
AAL19765 STM0829, glnP glutamine high-affinity transporter [Ensembl].... 0.04 OrthoFinder
AAL19824 STM0889, artQ arginine 3rd transport system [Ensembl].... 0.04 OrthoFinder
AAL20864 STM1952, yecS putative ABC-type amino acid transporter [Ensembl].... 0.04 OrthoFinder
AEA92878 OG1RF_10191 amino acid ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA93226 OG1RF_10539 amino acid ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AEA93582 OG1RF_10895 glutamine ABC superfamily ATP binding cassette... 0.06 OrthoFinder
AEA93583 OG1RF_10896 amino acid ABC superfamily ATP binding cassette... 0.07 OrthoFinder
AGT23904 N559_2192 amino acid ABC transporter [Ensembl]. transmembrane... 0.03 OrthoFinder
AGT25145 N559_3494 glutamine ABC transporter permease protein [Ensembl].... 0.04 OrthoFinder
AGT25284 N559_3642 glutamate/aspartate ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AGT25743 N559_4117 glutamate/aspartate transport system inner membrane... 0.08 OrthoFinder
AKI49734 L2625_01875 amino acid ABC transporter, permease protein [Ensembl].... 0.03 OrthoFinder
AKI50281 L2625_02449 polar amino acid ABC transporter, permease protein... 0.03 OrthoFinder
AKI50282 L2625_02450 polar amino acid ABC transporter, permease protein... 0.03 OrthoFinder
CCG26871 No alias ABC transporter membrane-spanning permease-glutamine... 0.03 OrthoFinder
CCL16928 BN171_1000002 ABC-type transport system, aminoacid-family permease... 0.04 OrthoFinder
CCL18563 BN171_2440004 ABC-type transport system,cystine/aminoacid-family... 0.07 OrthoFinder
CCL18564 BN171_2440005 ABC-type transport system,cystine/aminoacid-family... 0.08 OrthoFinder
CPD19910 tcyB, ERS093114_02272 cystine transport system permease protein [Ensembl].... 0.08 OrthoFinder
CPD30896 artQ, ERS093114_02521 extracellular glutamine-binding protein [Ensembl].... 0.03 OrthoFinder
CRO39408 gltK Glutamate/aspartate transport system permease protein... 0.06 OrthoFinder
CRO59374 glnM_3 putative glutamine ABC transporter permease protein GlnM... 0.13 OrthoFinder
CRO59397 yhdY Inner membrane amino-acid ABC transporter permease... 0.14 OrthoFinder
EDJ90647 CGSHi22421_04038 arginine ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
KNA59811 VCV51_030871 binding-protein-dependent transport system inner... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 74 273
No external refs found!