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  5. AGT24284

AGT24284 (N559_2608)


Aliases : N559_2608

Description : AMP-dependent synthetase and ligase [Ensembl]. AMP-binding enzyme C-terminal domain [InterProScan].


Gene families : OG_02_0000029 (OrthoFinder) Phylogenetic Tree(s): OG0000029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24284
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAC74771 fadK, b1701 short chain acyl-CoA synthetase, anaerobic [Ensembl].... 0.03 OrthoFinder
AAC74875 fadD, b1805 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)... 0.03 OrthoFinder
CCP42942 fadD4, Rv0214 Probable fatty-acid-CoA ligase FadD4 (fatty-acid-CoA... 0.02 OrthoFinder
CCP43289 fadD8, Rv0551c Probable fatty-acid-CoA ligase FadD8 (fatty-acid-CoA... 0.03 OrthoFinder
CRO59249 No alias Long-chain-fatty-acid--CoA ligase [Ensembl]. AMP-binding... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008924 malate dehydrogenase (quinone) activity IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0015129 lactate transmembrane transporter activity IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015727 lactate transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
MF GO:0015926 glucosidase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 420 495
IPR000873 AMP-dep_Synth/Lig 17 411
No external refs found!