AGT24481 (N559_2808, RstA)

Aliases : N559_2808, RstA

Description : DNA-binding transcriptional regulator RstA [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT24481
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AAC74214	phoP, b1130	response regulator in two-component regulatory system...	0.02	OrthoFinder
AAK99382	spr0578, rr09	Response regulator [Ensembl]. Helix-turn-helix domain,...	0.03	OrthoFinder
AAL20028	STM1096, copR	Copper resistance transcriptional regulatory protein...	0.05	OrthoFinder
AKI49374	lisR, L2625_01474	two component response regulator [Ensembl]....	0.04	OrthoFinder
AKI49504	L2625_01607	DNA-binding response regulator [Ensembl]. Signal...	0.03	OrthoFinder
CRN89694	tctD	Transcriptional regulatory protein tctD [Ensembl]....	0.03	OrthoFinder
CRO55563	arcA_1	Dye resistance protein [Ensembl]. Response regulator...	0.02	OrthoFinder
CRP27775	kdpE	KDP operon transcriptional regulatory protein KdpE...	0.02	OrthoFinder
CRP32671	czcR_3	Transcriptional activator protein CzcR [Ensembl]....	0.03	OrthoFinder
KNA51549	VCV51_033592	response regulator receiver domain-containing protein...	0.04	OrthoFinder
KNA52282	VCV51_033448	transcriptional regulatory protein [Ensembl]....	0.03	OrthoFinder
KNA56836	VCV51_030475, PhoB	phosphate regulon transcriptional regulatory protein...	0.03	OrthoFinder
KNA58243	VCV51_032751	response regulator receiver domain-containing protein...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0004592	pantoate-beta-alanine ligase activity	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
MF	GO:0008374	O-acyltransferase activity	IEP	Enrichment
MF	GO:0008770	[acyl-carrier-protein] phosphodiesterase activity	IEP	Enrichment
MF	GO:0008811	chloramphenicol O-acetyltransferase activity	IEP	Enrichment
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Enrichment
BP	GO:0015939	pantothenate metabolic process	IEP	Enrichment
BP	GO:0015940	pantothenate biosynthetic process	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016413	O-acetyltransferase activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Enrichment
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Enrichment
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	4	112
IPR001867	OmpR/PhoB-type_DNA-bd	156	232

External Links

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AGT24481 (N559_2808, RstA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation