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  5. AGT24828

AGT24828 (N559_3168)


Aliases : N559_3168

Description : crotonobetaine/carnitine-CoA ligase [Ensembl]. AMP-binding enzyme C-terminal domain [InterProScan].


Gene families : OG_02_0000029 (OrthoFinder) Phylogenetic Tree(s): OG0000029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24828
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
CCP43289 fadD8, Rv0551c Probable fatty-acid-CoA ligase FadD8 (fatty-acid-CoA... 0.03 OrthoFinder
CCP44314 fadD11, Rv1550 Probable fatty-acid-CoA ligase FadD11 (fatty-acid-CoA... 0.03 OrthoFinder
CCP45752 fadD22, Rv2948c P-hydroxybenzoyl-AMP ligase FadD22 [Ensembl].... 0.03 OrthoFinder
CPC94654 fadD, ERS093114_01698 long-chain-fatty-acid--CoA ligase [Ensembl]. AMP-binding... 0.03 OrthoFinder
EDJ91610 CGSHi22421_07562 acyl-CoA synthase [Ensembl]. AMP-binding enzyme... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 15 435
IPR025110 AMP-bd_C 444 519
No external refs found!