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  5. AGT24832

AGT24832 (N559_3172, LolE)


Aliases : N559_3172, LolE

Description : outer membrane-specific lipoprotein transporter subunit LolE [Ensembl]. MacB-like periplasmic core domain, ABC transporter permease protein domain, FtsX-like permease family [InterProScan].


Gene families : OG_02_0000459 (OrthoFinder) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24832
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC74200 lolC, b1116 lipoprotein-releasing system transmembrane protein... 0.06 OrthoFinder
AAC74202 lolE, b1118 lipoprotein-releasing system transmembrane protein... 0.1 OrthoFinder
AAL20146 STM1217, ycfU integral membrane protein ABC transporter [Ensembl].... 0.04 OrthoFinder
AAL20148 STM1219, ycfW integral membrane protein ABC transporter [Ensembl].... 0.1 OrthoFinder
AHY40154 CJ8421_04655 putative permease [Ensembl]. FtsX-like permease family... 0.02 OrthoFinder
AKP16175 lolE, WX61_02151 Lipoprotein-releasing system transmembrane protein LolE... 0.04 OrthoFinder
CCP43737 Rv0987 Probable adhesion component transport transmembrane... 0.03 OrthoFinder
EDJ90129 CGSHi22421_03378 ABC-type transport system, involved in lipoprotein... 0.06 OrthoFinder
KNA59434 VCV51_031277 LolC/E family lipoprotein releasing system [Ensembl].... 0.04 OrthoFinder
KNA59436 VCV51_031275 lipoprotein releasing system [Ensembl]. FtsX-like... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009246 enterobacterial common antigen biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0019203 carbohydrate phosphatase activity IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031589 cell-substrate adhesion IEP Enrichment
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0043708 cell adhesion involved in biofilm formation IEP Enrichment
BP GO:0043709 cell adhesion involved in single-species biofilm formation IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0046378 enterobacterial common antigen metabolic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0050308 sugar-phosphatase activity IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
InterPro domains Description Start Stop
IPR025857 MacB_PCD 27 239
IPR003838 ABC3_permease_dom 302 407
No external refs found!