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  5. AGT24938

AGT24938 (N559_3280)


Aliases : N559_3280

Description : putative extracellular solute-binding protein [Ensembl]. Solute-binding protein family 5 domain, family 5 Middle [InterProScan].


Gene families : OG_02_0000186 (OrthoFinder) Phylogenetic Tree(s): OG0000186_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24938
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAL20596 STM1679, mppA periplasmic murein tripeptide transport protein... 0.04 OrthoFinder
AEA94776 t0, OG1RF_12089 oligopeptide ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA95037 OG1RF_12350 oligopeptide ABC superfamily ATP binding cassette... 0.02 OrthoFinder
AKI50500 L2625_02690 bacterial extracellular solute-binding protein, family 5... 0.03 OrthoFinder
EDJ91927 oppB, CGSHi22421_09228 oligopeptide permease ABC transporter membrane protein... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008887 glycerate kinase activity IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0009267 cellular response to starvation IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0031388 organic acid phosphorylation IEP Enrichment
BP GO:0031667 response to nutrient levels IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
BP GO:0031669 cellular response to nutrient levels IEP Enrichment
BP GO:0042594 response to starvation IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR000914 SBP_5_dom 66 444
No external refs found!