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AGT25027 (N559_3374)


Aliases : N559_3374

Description : NADH oxidoreductase hcr [Ensembl]. Oxidoreductase NAD-binding domain, 2Fe-2S iron-sulfur cluster binding domain, Oxidoreductase FAD-binding domain, 2Fe-2S ferredoxin-type iron-sulfur binding domain [InterProScan].


Gene families : OG_02_0001408 (OrthoFinder) Phylogenetic Tree(s): OG0001408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25027
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAL19872 STM0936, hcr NADH oxidoreductase for hcp gene product [Ensembl].... 0.26 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006063 uronic acid metabolic process IEP Enrichment
BP GO:0006064 glucuronate catabolic process IEP Enrichment
MF GO:0008880 glucuronate isomerase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0010393 galacturonan metabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
BP GO:0019585 glucuronate metabolic process IEP Enrichment
BP GO:0045488 pectin metabolic process IEP Enrichment
BP GO:0045490 pectin catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0047487 oligogalacturonide lyase activity IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001433 OxRdtase_FAD/NAD-bd 105 200
IPR001041 2Fe-2S_ferredoxin-type 237 304
IPR008333 Cbr1-like_FAD-bd_dom 24 93
No external refs found!