AGT25042 (N559_3389)


Aliases : N559_3389

Description : putative positive response regulator [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25042
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.03 OrthoFinder
AAC76894 cpxR, b3912 response regulator in two-component regulatory system... 0.04 OrthoFinder
AAL21035 STM2131, baeR response regulator in two-component regulatory system... 0.04 OrthoFinder
AAL22899 STM4059, cpxR response reguator in two-component regulatory system... 0.03 OrthoFinder
AKI50514 L2625_02705 DNA-binding response regulator [Ensembl]. Signal... 0.03 OrthoFinder
CCL17650 BN171_1640040 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL17877 BN171_1920004 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL17895 BN171_1930007 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.02 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.02 OrthoFinder
CPD23371 kdpE, ERS093114_02345 DNA-binding response regulator KdpE [Ensembl].... 0.02 OrthoFinder
CRN75072 mprA_1 Mycobacterial persistence regulator A [Ensembl].... 0.03 OrthoFinder
CRN89694 tctD Transcriptional regulatory protein tctD [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 5 114
IPR001867 OmpR/PhoB-type_DNA-bd 153 229
No external refs found!