AGT25047 (N559_3395)


Aliases : N559_3395

Description : putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Ensembl].


Gene families : OG_02_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25047
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73941 potF, b0854 putrescine ABC transporter periplasmic binding protein... 0.04 OrthoFinder
AAL19813 STM0877, potF ABC superfamily (peri_perm), putrescine transporter... 0.18 OrthoFinder
CRO12353 potF_3 Putrescine-binding periplasmic protein precursor... 0.03 OrthoFinder
CRO92350 potF_4 Putrescine-binding periplasmic protein precursor... 0.07 OrthoFinder
CRO92378 potF_5 Putrescine-binding periplasmic protein precursor... 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
BP GO:0006011 UDP-glucose metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0009292 genetic transfer IEP Enrichment
BP GO:0009294 DNA mediated transformation IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0030243 cellulose metabolic process IEP Enrichment
BP GO:0030244 cellulose biosynthetic process IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR006059 SBP 46 335
No external refs found!