AGT25160 (N559_3512)

Aliases : N559_3512

Description : putative DNA-binding transcriptional regulator [Ensembl]. C-terminal domain, DNA-binding HTH domain, tetR family [InterProScan].

Gene families : OG_02_0002154 (OrthoFinder) Phylogenetic Tree(s): OG0002154_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT25160
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AAC73883 cecR, b0796 DUF1956 domain-containing tetR family putative... 0.05 OrthoFinder
AAL19756 STM0819, ybiH putative transcriptional repressor (TetR/AcrR family)... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR001647 HTH_TetR 12 57
IPR015292 Tscrpt_reg_YbiH_C 91 213
No external refs found!