AGT25177 (N559_3529, BasR)

Aliases : N559_3529, BasR

Description : DNA-binding transcriptional regulator BasR [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT25177
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.05 OrthoFinder
AAC77074 basR, b4113 response regulator in two-component regulatory system... 0.24 OrthoFinder
AAK99332 spr0528, vncR VncR, response regulator [Ensembl]. Transcriptional... 0.03 OrthoFinder
AAL20028 STM1096, copR Copper resistance transcriptional regulatory protein... 0.03 OrthoFinder
AAL20160 STM1231, phoP response regulator in two-component regulatory system... 0.04 OrthoFinder
AAL22051 STM3177, ygiX putative transcriptional regulator [Ensembl]. Response... 0.04 OrthoFinder
AAL23116 STM4292, basR response regulator in two-component regulatory system... 0.15 OrthoFinder
AEA92946 OG1RF_10259 response regulator [Ensembl]. Response regulator... 0.03 OrthoFinder
AGT26636 N559_5059, CpxR DNA-binding transcriptional regulator CpxR [Ensembl].... 0.03 OrthoFinder
AHY39611 CJ8421_01780 two-component regulator [Ensembl]. Transcriptional... 0.03 OrthoFinder
AHY40431 CJ8421_06120 DNA-binding response regulator [Ensembl].... 0.02 OrthoFinder
CCL18024 BN171_2030010 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCP43784 trcR, Rv1033c Two component transcriptional regulator TrcR [Ensembl].... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.04 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.05 OrthoFinder
CRN75072 mprA_1 Mycobacterial persistence regulator A [Ensembl].... 0.02 OrthoFinder
CRN97861 qseB_1 Transcriptional regulatory protein QseB [Ensembl].... 0.05 OrthoFinder
CRO19997 qseB_2 Transcriptional regulatory protein QseB [Ensembl].... 0.1 OrthoFinder
CRO24960 ompR_1 Transcriptional regulatory protein OmpR [Ensembl].... 0.07 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.05 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.03 OrthoFinder
CRP32671 czcR_3 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.04 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.09 OrthoFinder
CRP62590 phoP Virulence transcriptional regulatory protein PhoP... 0.04 OrthoFinder
EDJ90310 CGSHi22421_02241 transcriptional regulatory protein [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006493 protein O-linked glycosylation IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
MF GO:0050380 undecaprenyl-diphosphatase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR001867 OmpR/PhoB-type_DNA-bd 147 216
IPR001789 Sig_transdc_resp-reg_receiver 3 113
No external refs found!