AGT25318 (N559_3676)


Aliases : N559_3676

Description : putative LysR-family transcriptional regulator [Ensembl]. LysR substrate binding domain, lysR family [InterProScan].


Gene families : OG_02_0002780 (OrthoFinder) Phylogenetic Tree(s): OG0002780_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25318
Cluster HCCA: Cluster_5


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 134 295
IPR000847 Tscrpt_reg_HTH_LysR 12 69
No external refs found!