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  5. AGT25391

AGT25391 (N559_3755)


Aliases : N559_3755

Description : ABC transporter, substrate-binding protein, family 3 [Ensembl]. Solute-binding protein family 3/N-terminal domain of MltF [InterProScan].


Gene families : OG_02_0000028 (OrthoFinder) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25391
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAK98905 spr0101, ABC-SBP ABC transporter solute-binding protein-amino acid... 0.03 OrthoFinder
AAL19825 STM0890, artI arginine transport system [Ensembl]. Bacterial... 0.02 OrthoFinder
AAL21255 STM2354, hisJ histidine transport protein [Ensembl]. Bacterial... 0.03 OrthoFinder
AAL21256 STM2355, argT lysine/arginine/ornithine transport protein [Ensembl].... 0.03 OrthoFinder
AGT23574 N559_1841 cystine transporter subunit [Ensembl]. Solute-binding... 0.07 OrthoFinder
AGT23903 N559_2191 amino acid ABC transport system periplasmic binding... 0.05 OrthoFinder
AGT25040 N559_3387 arginine 3rd transport system periplasmic binding... 0.04 OrthoFinder
AGT25453 N559_3817 amino acid ABC transporter periplasmic amino... 0.06 OrthoFinder
AKP15747 WX61_01712 putative amino-acid ABC transporter-binding protein... 0.02 OrthoFinder
CBI66165 yckK, HPB8_608 putative polar amino acid transport system... 0.02 OrthoFinder
CCL16927 BN171_1000001 ABC-type transport system, aminoacid-family... 0.03 OrthoFinder
CCL18562 BN171_2440003 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CCL18566 BN171_2440007 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CRN71135 argT_1 Lysine-arginine-ornithine-binding periplasmic protein... 0.03 OrthoFinder
KNA58916 VCV51_031259 lysine-arginine-ornithine-binding periplasmic protein... 0.03 OrthoFinder
KNA59873 VCV51_032284 bacterial extracellular solute-binding protein, family 3... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 36 257
No external refs found!