AGT25453 (N559_3817)


Aliases : N559_3817

Description : amino acid ABC transporter periplasmic amino acid-binding protein [Ensembl]. Solute-binding protein family 3/N-terminal domain of MltF [InterProScan].


Gene families : OG_02_0000028 (OrthoFinder) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25453
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73898 glnH, b0811 glutamine transporter subunit [Ensembl]. Bacterial... 0.04 OrthoFinder
AAC73947 artJ, b0860 arginine ABC transporter periplasmic binding protein... 0.1 OrthoFinder
AAC74987 tcyJ, b1920 cystine transporter subunit [Ensembl]. Bacterial... 0.1 OrthoFinder
AAC75370 argT, b2310 lysine/arginine/ornithine transporter subunit [Ensembl].... 0.05 OrthoFinder
AAK98905 spr0101, ABC-SBP ABC transporter solute-binding protein-amino acid... 0.04 OrthoFinder
AAL00157 spr1353, glnH ABC transporter substrate-binding protein-glutamine... 0.03 OrthoFinder
AAL19825 STM0890, artI arginine transport system [Ensembl]. Bacterial... 0.03 OrthoFinder
AAL20866 STM1954, fliY putative periplasmic binding transport protein... 0.03 OrthoFinder
AAL21255 STM2354, hisJ histidine transport protein [Ensembl]. Bacterial... 0.04 OrthoFinder
AGT25391 N559_3755 ABC transporter, substrate-binding protein, family 3... 0.06 OrthoFinder
AKI50283 L2625_02451 polar amino acid ABC transporter, substrate-binding... 0.09 OrthoFinder
AKP15747 WX61_01712 putative amino-acid ABC transporter-binding protein... 0.05 OrthoFinder
CCG26201 No alias Cysteine ABC transporter, substrate-binding protein... 0.02 OrthoFinder
CCG26409 No alias Amino acid ABC transporter, amino acid-binding protein... 0.03 OrthoFinder
CCL16927 BN171_1000001 ABC-type transport system, aminoacid-family... 0.04 OrthoFinder
CCL18016 BN171_2030002 ABC-type transport system, aminoacid-family... 0.04 OrthoFinder
CCL18562 BN171_2440003 ABC-type transport system,cystine/aminoacid-family... 0.05 OrthoFinder
CCL18566 BN171_2440007 ABC-type transport system,cystine/aminoacid-family... 0.06 OrthoFinder
CRN71135 argT_1 Lysine-arginine-ornithine-binding periplasmic protein... 0.05 OrthoFinder
CRO48561 hisJ Histidine-binding periplasmic protein precursor... 0.05 OrthoFinder
CRP46906 fliY_2 Sulfate starvation-induced protein 7 [Ensembl].... 0.04 OrthoFinder
CRP49296 artJ ABC transporter arginine-binding protein 1 precursor... 0.04 OrthoFinder
EDJ90649 CGSHi22421_04048 arginine transporter permease subunit ArtQ [Ensembl].... 0.03 OrthoFinder
EDJ91875 CGSHi22421_08968 CTP synthetase [Ensembl]. Bacterial extracellular... 0.04 OrthoFinder
KNA53745 VCV51_033271 bacterial extracellular solute-binding protein, family 3... 0.07 OrthoFinder
KNA58916 VCV51_031259 lysine-arginine-ornithine-binding periplasmic protein... 0.04 OrthoFinder
KNA59810 VCV51_030870 lysine-arginine-ornithine-binding periplasmic protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009292 genetic transfer IEP Enrichment
BP GO:0009294 DNA mediated transformation IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 25 251
No external refs found!