AGT25593 (N559_3958)

Aliases : N559_3958

Description : acridine efflux pump [Ensembl]. AcrB/AcrD/AcrF family [InterProScan].

Gene families : OG_02_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT25593
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC73564 acrB, b0462 multidrug efflux system protein [Ensembl].... 0.03 OrthoFinder
AAL19429 STM0475, acrB RND family, acridine efflux pump [Ensembl].... 0.04 OrthoFinder
AKP14428 mexB, WX61_00346 Multidrug resistance protein MexB [Ensembl].... 0.03 OrthoFinder
CBI66363 acrB, HPB8_806 Acriflavine resistance protein (AcrB) [Ensembl].... 0.03 OrthoFinder
CCL18817 BN171_2660006 Putative multidrug efflux pump [Ensembl]. AcrB/AcrD/AcrF... 0.03 OrthoFinder
CRO58919 bepE_2 Efflux pump membrane transporter BepE [Ensembl].... 0.03 OrthoFinder
CRO88282 mexB Multidrug-efflux transporter MexB [Ensembl].... 0.03 OrthoFinder
CRP58341 mdtB_2 Multidrug transporter MdtB [Ensembl]. AcrB/AcrD/AcrF... 0.03 OrthoFinder
CRP65676 bepE_3 Efflux pump membrane transporter BepE [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016151 nickel cation binding IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 1 1029
No external refs found!