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  5. AGT25625

AGT25625 (N559_3996)


Aliases : N559_3996

Description : putative LRP-like transcriptional regulator [Ensembl]. Lrp/AsnC ligand binding domain [InterProScan].


Gene families : OG_02_0000090 (OrthoFinder) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25625
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AAC73550 decR, b0447 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
AKP14359 lrp_1, WX61_00271 Leucine-responsive regulatory protein [Ensembl].... 0.03 OrthoFinder
CCL19822 BN171_3520008 AsnC-family transcriptional regulator (fragment)... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR019887 Tscrpt_reg_AsnC/Lrp_C 68 142
No external refs found!