AGT25698 (N559_4072, PhoB)

Aliases : N559_4072, PhoB

Description : transcriptional regulator PhoB [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT25698
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AAC73502	phoB, b0399	response regulator in two-component regulatory system...	0.04	OrthoFinder
AAC75035	hprR, b1969	response regulator family protein [Ensembl]....	0.05	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.03	OrthoFinder
AAK99511	spr0707, ciaR	Response regulator, transcriptional regulatory protein...	0.02	OrthoFinder
AAL19351	STM0397, phoB	response regulator in two-component regulatory system...	0.04	OrthoFinder
AEA94850	vanR, OG1RF_12163	response regulator [Ensembl]. Response regulator...	0.03	OrthoFinder
CCG26613	CiaR	Two component system response regulator CiaR [Ensembl]....	0.03	OrthoFinder
CCG26924	No alias	Two-component system response regulator [Ensembl]....	0.03	OrthoFinder
CCL17156	BN171_1330017	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL17733	BN171_1740008	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL17829	vanR, BN171_1830003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL18125	kdpE, BN171_2100009	Two-component response regulator KdpE [Ensembl]....	0.02	OrthoFinder
CCL18472	BN171_2380003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL18738	BN171_260007	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL19749	BN171_3450003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL19804	BN171_3490007	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL20055	BN171_3670038	Two-component response regulator, CheY family [Ensembl]....	0.04	OrthoFinder
CCL20068	BN171_3690012	Two-component response regulator, CheY family [Ensembl]....	0.04	OrthoFinder
CCL20132	BN171_370006	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCP43225	regX3, Rv0491	Two component sensory transduction protein RegX3...	0.03	OrthoFinder
CCP43651	prrA, Rv0903c	Two component response transcriptional regulatory...	0.02	OrthoFinder
CCP43777	kdpE, Rv1027c	Probable transcriptional regulatory protein KdpE...	0.03	OrthoFinder
CPC31435	arlR, ERS093114_00002	Putative response regulator ArlR [Ensembl]....	0.02	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.03	OrthoFinder
CRO38230	rstA	Transcriptional regulatory protein RstA [Ensembl]....	0.04	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.03	OrthoFinder
CRO88807	walR_1	Transcriptional regulatory protein WalR [Ensembl]....	0.03	OrthoFinder
CRP18948	ompR_3	Transcriptional regulatory protein OmpR [Ensembl]....	0.04	OrthoFinder
CRP43486	qseB_3	Transcriptional regulatory protein QseB [Ensembl]....	0.02	OrthoFinder
CRP45027	ompR_4	Transcriptional regulatory protein OmpR [Ensembl]....	0.04	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.03	OrthoFinder
KNA52268	VCV51_033433	response regulator receiver domain-containing protein...	0.04	OrthoFinder
KNA56836	VCV51_030475, PhoB	phosphate regulon transcriptional regulatory protein...	0.04	OrthoFinder
KNA60550	VCV51_032221	response regulator receiver domain-containing protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Enrichment
MF	GO:0016791	phosphatase activity	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	151	225
IPR001789	Sig_transdc_resp-reg_receiver	5	117

External Links

No external refs found!

AGT25698 (N559_4072, PhoB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation